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It said the top court verdict, which had dealt with an issue of a "very sensitive nature", has caused "commotion", "anger, unease and a sense of disharmony" in the country.
He also stressed that there was a separation of powers between the legislature, the executive and the judiciary which was "inviolable".
"It is submitted that this judgement has diluted, for the reasons stated, the provisions of the Atrocities Act read with the Code, resulting in great damage to the country," the Attorney General said in his written submissions.
"This case dealing with the issue of very sensitive nature has caused a lot of commotion in the country and is also creating anger, unease and a sense of disharmony," it said.
The Centre also said that the "confusion" created by the apex court verdict may have to be corrected by reviewing the judgement and recalling the directions issued by the top court.
"Bland statement that 'power to declare law carries with it, within the limits of duty, to make law when none exists' is wholly fallacious because we live under a written Constitution of which separation of powers between the legislature, the executive and the judiciary is the very basic structure and is inviolable," it said.