The BJP, however, claimed that the direction by its minority cell has been "misunderstood" and no distinction had been made on the basis of religion.
Congress General Secretary Digvijay Singh asked if BJP was trying to enforce a "dress code" or playing "vote bank politics" by asking Muslims to attend its meetings wearing 'burqas' and skull caps.
"Whether it is a dress code or vote bank politics is a question which the media should ask the BJP," he said in a tweet.
"People were allowed to attend the (BJP) rally in their traditional dresses whether women were wearing burqa or jeans or men had "topi, safa, pagri" as headgear did not matter," party spokesperson Jyoti Kiran told PTI.
Another spokesman Vimal Katiyar said, "BJP Minority Morcha state President Ameen Pathan had directed in his recent meeting on the eve of rally that any woman wearing burqa should not be stopped and allowed to enter the women's blocks at the rally venue.
Scores of burqa-clad women attended the rally of Modi, who is believed to be days away from being named the BJP's prime ministerial candidate.
Modi has been accusing Congress of following a policy of appeasement of Muslims and had even said it was wearing a "'burqa' of secularism".
Kiran said no separate sitting blocks were set up for any community in the concluding Suraj Sankalp Yatra rally addressed by Modi and party President Rajnath Singh.
"Of course women wearing burqa were comfortably sitting in the women's blocks without any discrimination," she said.
Katiyar alleged that during a public rally by Congress Muslim women with burqa were not allowed due to security reasons.
