CBI sources said they had wanted to retain Subramanium as he had been appearing in the corruption case against former Enforcement Directorate official Ashok Kumar Aggarwal for nearly a decade.
They said their requests were not accepted by the Ministry which asked the agency through DoPT to replace him with Attorney General G E Vahanvati.
Meanwhile, the matter was today adjourned in the Supreme Court to August one.
Prime Minister Manmohan Singh and the then Law Minister Veerappa Moily had talked to Subramanium to persuade him not to quit but he insisted on doing so.
CBI has booked Aggarwal in two cases in 2002 after sanction from the Finance Ministry which related to alleged criminal conspiracy to extort money from a trader Subhash Barjatya by threatening to book him in a false case of violation of foreign exchange regulations.
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