While this accelerated absorption has helped keep human habitats cooler, in the long run it could be a ticking time bomb that disrupts weather and climate globally, scientists warned.
"We estimate that half of the total global ocean heat uptake since 1865 has accumulated since 1997," a team of scientists led by Peter Gleckler of the Laurence Livermore National Laboratory in California reported.
A third of that recent build up, they found, occurred at depths of 700 metres (2,300 feet) or greater, beyond the reach of sunlight.
Some had interpreted this as a slowdown in warming overall.
Surface waters are thought to have previously absorbed the bulk of heat taken up by the ocean. Why the ratio is changing is not fully understood.
The findings, published, in Nature Climate Change, were based in large part on observation.
The earliest data was gathered in the 19th century by the HMS Challenger expedition, a scientific foray launched by Britain's Royal Society that is often credited with laying the foundation for modern oceanography.
Covering two-thirds of Earth's surface, the oceans have absorbed more than 90 per cent of the excess heat generated by man-made greenhouse gases.
In a stroke of luck for humankind, this has made the surface of the planet less hot than it would otherwise have been.
But there could be severe consequences further down the road, scientists cautioned.
"It's a bit of a mixed blessing," said John Shepherd, a researcher at the University of Southampton's National Oceanography Centre, who was not involved in the study.
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