The army said that crossings will be open for "humanitarian and medical" cases only and for Palestinians to worship at al-Aqsa mosque in Jerusalem.
Tens of thousands of Palestinians attended prayers at the mosque today, the first of the Muslim holy month of Ramadan. Police were on high alert in Jerusalem and prayers passed peacefully.
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West Bank closures are often imposed ahead of holidays in Israel when there are fears of Palestinian attacks. Tensions are especially high now after Palestinian gunmen killed four people and wounded five others in a popular and crowded area of Tel Aviv on Wednesday night.
The military said it arrested several people in connection to that attack in the West Bank overnight but there were no further details.
In raids on Saturday morning in the territory, Israeli troops found two Palestinian workshops used for manufacturing weapons, including the improvised home-made gun used in Wednesday's shootings at a popular Tel Aviv restaurant and shopping area.
Over the last eight months, Palestinians have carried out dozens of attacks on civilians and security forces, mostly stabbings, shootings and car ramming assaults that have killed 32 Israelis and two Americans.
About 200 Palestinians have been killed during that time, most identified as attackers by Israel. The assaults were once near-daily incidents but they have become less frequent in recent weeks.
The day after the Palestinian shooting, Israel froze 83,000 permits for Palestinians in the West Bank to visit relatives in Israel.
The army imposed checkpoints to restrict movement in and out of the village where the Palestinian gunmen in the Tel Aviv attack were from.
The office of the United Nations' High Commissioner for Human Rights, Zeid Ra'ad al-Hussein, today condemned the Tel Aviv shooting.
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