"If Mufti Syed (Sayeed) can't defend the state's dignity & flag from the nefarious plans of his allies he should step down and find someone who can!" Omar wrote on Twitter.
Omar's comments came soon after a division bench of the JK High Court stayed implementing the order of a single bench which had called on Constitutional authorities in the state to hoist the state flag on official buildings and vehicles.
The National Conference leader's comments sparked a debate on the social networking site with some questioning his patriotism.
Former Inspector General of Police and BJP leader Farooq Khan had filed an LPA before the High Court against the order of Justice Hasnain Masoodi passed on December 27.
The High Court constituted a special Division Bench comprising Justices B L Bhat and Tashi Rabstan, who stayed the single bench order after hearing Khan's counsel Sunil Sethi.
Omar asked why Jammu and Kashmir was expected to respect the terms of accession while the rest of the country could disregard it.
"Why is only J&K expected to respect the terms of accession while the rest of the country can disregard them with impunity?" he asked.
Responding to the online criticism, Omar asserted that two flags will fly in the state as long as it continued to be part of India.
"Here's what I'll say -- so long as J&K is a part of India the two flags will continue to fly & we'll take pride in it.
"Having a state flag accepted & recognised by the Constitutions of India & J&K is NOT Azadi. Jeez!" he wrote.
Responding to a tweet by a News TV anchor, Omar asked: "Did he just call me a Pak agent?" "Big story breaking on @NewsX J&k high court order stayed. Two flags won't fly in J&K. What'll @abdullah_omar & 'Pak agents' say now?" Rahul Shivshanker of NewsX wrote on his twitter handle.
Omar dismissed the journalist's tirade saying he had "never craved" for any certificate of patriotism "from the likes of him anyway(.) So no big deal.
"I'd rather a tirade based on facts than a campaign based on wilful ignorance & propaganda," he added.
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