The arrests were made during simultaneous raids in the city and at Bhatkal in Uttara Kannada district during which a "substantial" quantity of explosive substances used for making Improvised Explosive Devices were seized, Bengaluru Police Commissioner M N Reddi told reporters here.
Ammonium nitrate, detonators, electronic timer devices, digital circuits, circuit making material, PVC pipes, gel based explosive material and fuel oil were seized, he said.
Reddi gave the names of the arrested as Syed Ismail Aafaque, aged 34, Saddam Hussein, 35, and Abdus Sabuur, 24, an MBA student, saying they were found to be in regular interaction with other members of the banned organisations.
Intial information showed that they were operating under the direct instructions of a handler in the higher rungs within their organisation, he said.
To a query, he said, there was no "direct link" of the arrested alleged IM operatives to the December 28 blast on Church Street here, but their suspected role was being probed.
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