Abdallah Ghanayem, 21, died after being struck by the vehicle during clashes that erupted in the village of Kfar Malik following a dawn Israeli army raid, the sources said.
An army spokesman told AFP that a Palestinian had died after he threw an incendiary device at a jeep and the vehicle overturned on him.
It was the second death of a Palestinian in clashes with Israeli forces in less than a week, after a man was shot dead during a confrontation with the army on Wednesday in a northern West Bank refugee camp.