Autophagy is a fundamental process in cell physiology with major implications for human health and disease.
The process is essential for the orderly degradation and recycling of damaged cell parts and its failure is believed to be responsible for ageing and cell damage.
Researchers first observed during the 1960s that the cell could destroy its own contents by wrapping them up in membranes and transporting them to a recycling compartment called the lysosome.
He then went on to explain the underlying mechanisms for autophagy in yeast and showed that similar sophisticated machinery is used in human cells.
Ohsumi's discoveries "have led to a new paradigm in the understanding of how the cell recycles its contents," the jury said.
"Mutations in autophagy genes can cause disease, and the autophagic process is involved in several conditions including cancer and neurological disease," it added.
The prize comes with eight million Swedish kronor (around USD 936,000 or 834,000 euros).
Last year, Irish-born William Campbell of the US, Satoshi Omura of Japan and China's Tu Youyou won the prestigious award for their discoveries of treatments against parasites.
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