The tropical storm has affected an area the size of Spain in the southern United States, and which is likely to worsen in the coming hours as the rain continues.
Guterres is following the developments in Texas "with great concern," the UN Secretary-General's spokesperson said.
"The Secretary-General is saddened by the loss of life and extends his condolences to the Government and people of the United States of America," the spokesperson said. "He wishes those injured a speedy recovery."
Guterres, who is currently in the Middle East on an official visit with Israeli and Palestinian authorities, added that his thoughts are with all the victims and the first responders.
Earlier in the day, the UN chief tweeted that he was "shocked" at the images of the devastation.
"Shocked at the images of #HurricaneHarvey's devastation. My thoughts are with all the victims and the first responders," he said in the tweet.
Clare Nullis, a WMO spokesperson told journalists in Geneva that rivers are rising and the disaster is "far from over."
"Harvey has caused so much rainfall that the National Weather Service has had to update the colour charts on its graphics in order to effectively map it," Nullis said.
A new colour category has been introduced for rainfall totals above 30 inches or 76 centimetres, Nullis said.
Although the storm is no longer classified as a hurricane, it is moving slowly and generating heavy rainfall.
The UN disaster risk reduction office today extended condolences to the families and friends of the people killed, and said the destruction caused by Harvey is already in the millions of dollars.
"Hurricane Harvey has revealed how exposed even high- income countries are when building takes place on a grand scale along coastlines exposed to tropical storms. There is no doubt that along with failings in risk governance, climate change is intensifying the cocktail of man-made risk to an unprecedented degree," said UN Secretary-General's Special Representative for Disaster Risk Reduction, Robert Glasser.
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