Classrooms have been empty since the government announced a state of emergency in July in response to an outbreak which has killed almost 9,000 people in the region, more than 3,000 of them in Sierra Leone.
President Ernest Bai Koroma's office said he had granted permission for work to start on "water and sanitation issues, Ebola screenings and psychosocial support", ahead of the reopening.
"Thermometers will be made available to all schools to deal with any sudden attack before referral to a holding centre," education minister Minkailu Bah was quoted as saying.
The announcement clarifies a commitment made by the government in January to have all schools open by the end of March.
Sierra Leone is one of three west African countries hit by the deadliest Ebola outbreak on record, together with Guinea and Liberia.
The rate of new infections has slowed significantly in recent weeks, paving the way for a gradual return to normal.
More than a third of Sierra Leone's population of six million are aged between three and 17, although in reality the secondary school attendance rate is less than 40 percent for both boys and girls.
"The decision will be a recipe for danger and it would have been better for the authorities to wait a few more months before making the reopening," one caller said.
But another listener welcomed "a thoughtful decision for all" that would halt a rise in teenage pregnancy seen since schools closed and show the war against Ebola was being won.
UNICEF spokesman Christophe Boulierac told reporters in Geneva on Tuesday around 500,000 children -- around a quarter of the total roll -- had returned to school in Guinea since classrooms reopened on January 19.
In a second announcement on Wednesday, Sierra Leone's presidency said it was delaying a population census planned for April until December because of the crisis.
Results of the survey -- already delayed once due to the crisis -- take 12 months to compile in a country where the majority live in remote tribal chiefdoms with poor infrastructure.
"The postponement will not compromise the census data quality. It will however affect the timing of the release of the census results, and the final results initially expected in December 2015 will only be available by December 2016," the statement said.
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