"We received a complaint last night from the relative of the girl who accused Sunith Kumar of raping her repeatedly on different occasions.
"We have registered a case and are questioning Kumar," Assistant Commissioner of Police (Malkajgiri Division) G Sundeep told PTI.
A case was booked against Kumar under IPC section 376 (rape) and under relevant sections of POCSO Act, the official said.
The orphanage houses both boys and girls, police said.
In a related development, Balala Hakkula Sangham, an NGO working for child rights, condemned the incident.
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