The lower house of parliament adopted the 21st Constitutional Amendment Bill and the Pakistan Army (Amendment) Bill 2015 after 247 members, more than a two- thirds majority, voted in favour of the amendment.
Speaker Ayaz Sadiq said the constitutional amendment was passed without any member opposing it.
However, the two major religious political parties Jamaat- e-Islami (JI) and Jamiat Ulema-i-Islam-Fazl (JUI-F) abstained from voting.
Imran Khan's Tehreek-i-Insaf did not attend the session as its members are boycotting the house since August last year when the cricketer-turned-politician launched a movement to topple the government over alleged electoral fraud.
The courts are being set up for two years and will become dysfunctional at the end of constitutional limit.
They will be staffed by serving military men but only federal government will be authorised to send a case for trial in these courts.
The two bills were expected to be passed yesterday but voting was deferred after the government fell short of the required two-thirds majority as only 218 members were present in the National Assembly of 342 members.
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