Katju issued the appeal after National Commission for Minorities (NCM) chairman Wajahat Habibullah wrote to him objecting to the speculation by media in the wake of the Hyderabad blasts case.
"It is indeed unfortunate that in recent years an impression has been sought to be created by certain communal elements that all Muslims are terrorists, and Muslims are often discriminated in our country in getting jobs, bank loans, houses on rent etc as mentioned in the Sachar Committee Report," Katju said in a statement released here.
Katju said that while he believed persons who have committed such heinous crimes should correctly be identified and given harsh punishment, it did not always happen and innocent people were arrested.
The former Supreme Court judge said finding out the real culprits required scientific investigation, the skills for which the police lacked.
Katju said that in western countries the police reach the scene of the crime and look for finger prints, ashes, blood stains, fibres, etc and use the data to find out the antecedents of suspects.
"Since an impression has been created in some quarters that most Muslims are terrorists, the police often arrest some Muslims merely on suspicions," he said.
Katju said that a person arrested in such conditions finds it difficult to get bail and added that there were many instances of false implication of Muslims in bomb blast cases.
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