Two passengers were rescued by a fisherman and some villagers in waters near Sabah state on Borneo island today evening and taken to hospital.
They told authorities the boat had been travelling from the southwestern coast of Sabah to Indonesia yesterday evening when it overturned and sank.
A search was under way for the missing passengers who are feared drowned.
Coast guard First Admiral Zubil Mat Som said it would be challenging to find them because the accident was reported some 24 hours after it happened.
In January, a tourist boat with Chinese tourists capsized off Sabah. Most were rescued after more than 30 hours.
Another incident in January saw several bodies washed ashore at a beach in the Malaysian state of Johor after a boat believed to be carrying some 40 Indonesian illegal immigrants capsized in rough seas.
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