But Tharman Shanmugaratnam said the Fed must manage the move carefully, citing the week's volatility that has seen the Indian rupee plunge to record lows and other currencies also founder.
"The tapering of (the Fed's bond-buying scheme) and tightening of US monetary policy, when it occurs, will not be a bad thing for the region's economies," he said at a regional business forum.
"Low or negative real interest rates have inevitably led to a search for yield and a build-up of financial imbalances in Asia."
But Shanmugaratnam said the unwinding of QE would take place together with a recovery in the US economy "and is not in itself a negative for ASEAN countries".
He added that growth in the Association of Southeast Asian Nations is supported by structural reforms and that the risk of a balance of payments crisis was "relatively low".
But Shanmugaratnam said that the current fluctuations in global financial markets "underscores the need for the tapering process, when it occurs, to be gradual and managed very carefully".
This week has seen the rupee slump to an all-time low against the dollar, while Indonesia's rupiah is sitting around four-year lows and the baht at a more than one year low.
And among stock markets Jakarta fell almost nine percent in the four days ending yesterday, while Bangkok was down 6.5 per cent over the same period. Manila slid six per cent yesterday, its only trading day so far.
"Financial volatility is likely to occur from time to time, given the market's tendency to anticipate and front-run monetary policy moves," he said.
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