The infection, which often spreads in hospitals and other health care settings, was identified by the US Centers for Disease Control and Prevention in June 2016 as an emerging global threat.
Four of the patients diagnosed with the infection have died, although the precise causes remain unclear, the CDC said.
"We need to act now to better understand, contain and stop the spread of this drug-resistant fungus," CDC Director Tom Frieden said.
The report in the CDC's Morbidity and Mortality Weekly Report (MMWR) described seven of the cases, which occurred between May 2013 and August 2016.
Another six "were identified after the period covered by the report and are still under investigation," it said.
The first seven cases were reported in New York, Illinois, Maryland and New Jersey.
"All of the patients had serious underlying medical conditions and had been hospitalized an average of 18 days when C auris was identified," it said.
Of the four who died, "it is unclear whether the deaths were associated with C auris infection or underlying health conditions."
"Samples of C auris strains from other countries have been found to be resistant to all three major classes of antifungal medications."
Although lab tests showed the US strains were related to strains from South Asia and South America, none of the patients had traveled to or had any direct links to those regions.
The health authorities believe the US infections were acquired locally.
"It appears that C auris arrived in the United States only in the past few years," said Tom Chiller, chief of CDC's Mycotic Diseases Branch.
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