Militants believed to be linked to radical sect Boko Haram opened fire on people worshipping inside the mosque in Konduga near Nigeria's restive city of Maiduguri on Sunday, according to some security sources.
At least 44 worshippers have been shot dead.
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It was not immediately clear why the mosque in Konduga was targeted, but Boko Haram has in the past attacked mosques whose clerics have spoken out against religious extremism. The group also has attacked Christians outside churches and teachers and schoolchildren, as well as government and military targets.
Nigeria declared a state of emergency in three northeastern states in May as it fights Islamist militants.
Boko Haram aims to establish and Islamic caliphate in the oil-rich country and more than 2000 persons have died since it commenced killings and bombings mostly in the northern part of the country.
Nigeria's 150 million people are evenly distributed among Christians and Muslims.
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