A femur found by chance on the banks of a west Siberian river in 2008 is that of a man who died around 45,000 years ago, they said.
Teased out of collagen in the ancient bone, the genome contains traces from Neanderthals -- a cousin species who lived in Eurasia alongside H. Sapiens before mysteriously disappearing.
Previous research has found that Neanderthals and H. sapiens interbred, leaving a tiny Neanderthal imprint of just about two percent in humans today, except for Africans.
Dating when Neanderthals and H. Sapiens interbred would also indicate when H. Sapiens embarked on a key phase of this trek -- the push out of Eurasia and into South and later Southeast Asia.
The new study, published in the journal Nature, was headed by Svante Paabo, a renowned geneticist at the Max Planck Institute for Evolutionary Anthropology in Leipzig, Germany, who has pioneered research into Neanderthals.
The bone found at the Irtyush River, near the settlement of Ust'-Ishim, carries slightly more Neanderthal DNA than non-Africans today, the team found.
These differences provide a clue for a "molecular calendar", or dating DNA according to mutations over thousands of years.
Using this method, Paabo's team estimate interbreeding between Neanderthals and H. Sapiens occurred 7,000 to 13,000 years before the Siberian individual lived -- thus no more than 60,000 years ago.
This provides a rough date for estimating when H. Sapiens headed into South Asia, Chris Stringer, a professor at Britain's Natural History Museum, said in a comment on the study.
"The ancestors of Australasians, with their similar input of Neanderthal DNA to Eurasians, must have been part of a late, rather than early, dispersal through Neanderthal territory," Stringer said in a press release.
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