El Nino improves the global yield of soybeans by 2.1 to 5.4 percent, but changes the yields of maize, rice and wheat by -4.3 percent to +0.8 percent, they said.
When El Nino goes into reverse, a process called La Nina, the change in global average yields of all four crops range from zero to -4.5 percent, according to a study in the journal Nature Communications.
El Nino is the name for a pendulum swing in weather patterns that can cause widespread disruption.
The warmth typically brings exceptional rainfall to usually arid countries in western South America and causes drought and dryness in the tropical western Pacific, with knock-on effects in other continents.
The return of the pendulum, La Nina, is a cold phase that usually occurs the following year.
The study, led by Toshichika Iizumi of the National Institute for Agro-Environmental Sciences in Tsukuba, Japan, is based on harvest data from 1984 to 2004 in producer countries.
El Nino, they found, has a negative impact on maize, also called corn, in the southeastern United States, China, East and West Africa, Mexico and Indonesia.
Slimmer harvests of rice occur in southern China, Myanmar and Tanzania, and of wheat in part of China, the United States, Australia, Mexico and parts of Europe.
Conversely, El Ninos have a positive effect on about a third of land where these four crops are grown.
Beneficiaries include Brazil and Argentina for maize; the United States and Brazil for soybean; rice in parts of China and Indonesia, and wheat in Argentina and part of South Africa.
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