The study estimates that the world's desert aquifers contain roughly 1 trillion metric tonnes of carbon - about a quarter more than the amount stored in living plants on land.
Humans add carbon dioxide to the atmosphere through fossil fuel combustion and deforestation. About 40 per cent of this carbon stays in the atmosphere and roughly 30 per cent enters the ocean.
Scientists have been searching for a place on land where the additional carbon is being stored - the so-called "missing carbon sink."
The new study suggests some of this carbon may be disappearing underneath the world's deserts - a process exacerbated by irrigation.
Scientists examining the flow of water through a Chinese desert found that carbon from the atmosphere is being absorbed by crops, released into the soil and transported underground in groundwater - a process that picked up when farming entered the region 2,000 years ago.
The new study estimates that because of agriculture roughly 14 times more carbon than previously thought could be entering these underground desert aquifers every year.
These underground pools that taken together cover an area the size of North America may account for at least a portion of the "missing carbon sink" for which scientists have been searching.
"The carbon is stored in these geological structures covered by thick layers of sand, and it may never return to the atmosphere," said Yan Li, a desert biogeochemist with the Chinese Academy of Sciences in Urumqi, Xinjiang, and lead author of the study accepted for publication in Geophysical Research Letters, a journal of the American Geophysical Union.
Knowing the locations of carbon sinks could improve models used to predict future climate change and enhance calculations of the Earth's carbon budget, or the amount of fossil fuels humans can burn without causing major changes in the Earth's temperature, researchers said.
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