Public transport services, including autorickshaws, were off the roads while some private vehicles were seen plying in various parts of the city where police personnel kept a tight vigil at vantage points.
A near total shutdown like situation prevailed in the city and several other parts of the state since last evening itself.
The focus today turned to Rajaji Hall where Jayalalithaa's body is lying in state to enable public pay their homage.
Suburban train services, however, were being operated in the city, albeit with lower passenger rush.
Long distance trains arriving at Chennai Central and Egmore stations were on time.
The state government has declared a holiday today for its offices and three-days for educational institutions as a mark of respect to the departed leader.
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A report from Madurai said the entire temple city mourned Jayalalithaa's death with all shops closed and transport facilities including buses and auto rickshaws off the roads.
Officials said those who reached Madurai by train and flight this morning took private transport to reach home.
The main bus stands wore a deserted look. Inter-state and long distance government buses bound here from various destinations, including from Kerala and Karnataka did not arrive as they had been stopped at the borders.
Fishermen colonies mourned the death of Jayalalithaa in Tuticorin, Rameswaram and Kanyakumari.
Police said there was no untoward incident in the region.
