"President Jonathan has placed his country's interests first by conceding the election and congratulating president- elect (Muhammadu) Buhari on his victory," Obama said in a White House statement.
Buhari won the election by 2.57 million votes official results showed today, defeating incumbent Jonathan in a close fought race.
"I look forward to working with President Jonathan throughout the remainder of his term, and I thank him for his many years of service and his statesmanlike conduct at this critical juncture," Obama said.
"The last few days have shown the world the strength of Nigeria's commitment to democratic principles," Obama said.
"By turning out in large numbers and sometimes waiting all day to cast their votes, Nigerians came together to decide the future of their country peacefully."
After an often bitter campaign that included highly charged rhetoric on both sides, Buhari said he planned to meet with Jonathan soon to plan the transition.
Buhari, a 72-year-old former army general who led Nigeria as a military ruler in the 1980s, said the vote had proved the country's "belief in democracy."
Obama also praised Nigeria's Independent National Election Commission (INEC) and its chairman, which he said "deserve special recognition for what independent international observers have deemed a largely peaceful and orderly vote.
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