"We are satisfied that we have stabilised the situation and further loss of life has been prevented," a government statement said.
"Security agencies continue to work around the clock to protect both foreign nationals and South African citizens against any attacks."
The crackdown came after at least seven people were killed as mobs hunted down migrant workers from Zimbabwe, Mozambique and other African countries, forcing hundreds of terrified families to abandon their homes.
The arrests of illegal immigrants has prompted charges that the government was fanning xenophobic sentiment, though authorities categorically denied that the operation targeted foreigners.
Some 2,260 South Africans have been arrested on a variety of charges since the operation began.
"We will, in the next weeks and months, accelerate our efforts to take back public buildings that have been hijacked, either by foreign nationals or by South Africans; rid our townships and villages of drugs... That are destroying the lives of many young people," the government statement added.
While South African President Jacob Zuma has denounced the anti-immigrant violence he also promised to step up a crackdown on illegal immigration.
The police operation was strongly criticised during a rally yesterday in an immigrant neighbourhood in Johannesburg.
"Its timing, coming in the wake of the violent attacks targeting in particular people of African origin, feeds into the misconceptions that migrants are to blame for all our social and economic ills," said Zwelinzima Vavi, ex-secretary general of the Congress of South African Trade Unions.
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