The camp was uncovered just a kilometre from a similar encampment on a steep hillside near the Malaysian border, where forensic teams found 26 bodies over the weekend -- all but one buried in shallow graves.
"We found the second camp yesterday evening," national police spokesman Prawut Thavornsiri told reporters, saying it was near the first camp 25 kilometres (16 miles) west of Padang Besar in Songkhla province.
"We also found five graves but cannot yet confirm whether any bodies are in them. Authorities will look into this," he added.
Stung by that notorious reputation, Thailand's military government has launched a crackdown in recent months, arresting scores of officials.
But the grim discovery of bodies in various stages of decay has vividly illustrated the enormous dangers faced by desperate migrants trying to flee persecution or poverty.
Each year tens of thousands of Rohingya Muslims from Myanmar and Bangladesh make the dangerous sea crossing to southern Thailand, a well-worn trafficking route. They are often headed south to Malaysia and beyond.
The recent crackdown -- sparked by the arrest of an alleged major migrant kingpin known as "Anwar" -- has forced smugglers to switch tactics, emptying camps but leaving the weak behind to fend for themselves.
Two adults suffering from malnutrition and scabies were discovered at the first camp and taken to hospital. A fresh corpse was also out in the open.
During a visit to the region on Saturday AFP also came across two teenage migrant boys who had been apprehended by police.
The exodus of Rohingya -- described by the UN as one of the world's most persecuted minorities -- followed deadly communal unrest which broke out in western Myanmar's Rakhine state in 2012.
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