The incident was reported from Saint Paul's Convent School here, where students from grades one to five performed to the song during their annual day function.
Following this, members of the Karni Sena allegedly destroyed school property while the performance was going on. The police were informed about the incident and reached the spot to investigate.
One student got injured in the quarrel.
Bhansali's magnum opus has time and again run into trouble with members of the Karni Sena, who allege that the movie shows Rajput legacy in bad light, and that historical facts have been tampered with.
The movie is slated to release on January 25.