India have kept most of the squad that won the T20I series in Australia, with one major boost, Hardik Pandya returns after recovering from a left quadricep injury.
According to media reports, officials at the CoE were impressed by Gill's intensity and freedom of movement during recent sessions
Hardik is set to play his first match in nearly two and a half months in the Syed Mushtaq Ali Trophy (SMAT), representing Baroda against Punjab on Tuesday in Hyderabad.
Two specialist batters, B Sai Sudharsan and Devdutt Padikkal, are available, along with seam-bowling allrounder Nitish Kumar Reddy, who rejoins the squad after being rested for the first Test.
In its official statement, the BCCI revealed that Gill has been responding positively to treatment and has been cleared to travel.
BCCI confirmed the development minutes before the start of day three, ending all hopes of Gill returning to rescue his team on a wicket that has only grown more treacherous with time.
Hours after leaving the field, Gill was seen being stretchered into an ambulance, wearing a cervical collar to lock his neck in place.
The franchise, which has consistently been a strong contender since their debut in 2022, has largely kept their core intact, focusing on retaining key players for the upcoming season.
Concern for India as Shubman Gill walks off with apparent neck injury after brief but attacking start
India have received a major boost with Rishabh Pant returning from the foot injury that sidelined him for three Tests.
While Jasprit Bumrah and Mohammad Siraj are certain starters, Akash Deep remains the third pace option in the squad.
At 38, Rohit Sharma achieves a long-awaited career milestone by rising to the top of the ICC ODI batting charts for the first time, overtaking Shubman Gill
Gill clarified that no formal discussions had taken place yet regarding the duo's playing schedule in the coming months
Gill described the win as nearly flawless and felt that watching two of India's most experienced batters construct the chase was a special experience
With the series already lost, Team India will be expected to make at least one or two changes in their line-up for the 3rd ODI.
With his ODI loss in Perth, Shubman Gill has become only the ninth cricketer in the world to lose his debut match as captain in all three formats
India vs Australia 1st ODI Highlights: This is also Australia first ever ODI win at Optus Stadium in Perth
Rohit, despite losing his wicket cheaply, is looking very relaxed and cheering the dressing room with his usual antics in the dressing room
With the 1st ODI scheduled to be played on October 19 at the Optus Stadium, the fans will be looking forward to watch their cricketing heroes play the 50-over format after a long time.
The men in blue departed from New Delhi, India, on Wednesday morning, 24 hours after finishing their two-match Test series vs West Indies